CDS

Accession Number TCMCG006C65750
gbkey CDS
Protein Id XP_013712081.1
Location complement(join(24430233..24430766,24430856..24431169,24431268..24431336,24442133..24442247,24442335..24442406,24442481..24442579,24442660..24442731,24442863..24442937,24443048..24443253,24443335..24443553,24443637..24444576,24444578..24444766,24445330..24445470))
Gene LOC106415826
GeneID 106415826
Organism Brassica napus

Protein

Length 1014aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013856627.2
Definition LOW QUALITY PROTEIN: actin cytoskeleton-regulatory complex protein PAN1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category TU
Description Calcium-binding EF hand family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K12472        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000147        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005509        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030479        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030864        [VIEW IN EMBL-EBI]
GO:0030865        [VIEW IN EMBL-EBI]
GO:0030866        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044396        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061645        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAGGGCAGAATCCGAACATGGATCAATTCGAGGCGTACTTCAAGAGAGCTGATTTGGACGGAGATGGTCGGATCAGTGGAGCCGAAGCTGTTGGCTTTTTTCAAGGATCTGGCTTGCCCAAGCCAGTTCTCTTCCAGATATGGTCGCTTTCTGATCGATCAGGCAGTGGTTTCCTTGGTCGGCAAGACTTTTATAACTCTCTGAGGCTTGTAACAGTGGCACAGAGCAAGAGAGACCTGACACCTGAGATTGTTAATGCAGCACTGAATACTCCTGCCGCAGCCAAAATACCAGCGCCCAAAATTAACCTTTCAGCTATTCCTGCACCCCAACCTAATCCTGCTGCTACCACAGCTCGTCCGGTTTCCTCACCAGGTCATCAGAATGTTGGGTTTAGAAGACCAGGAGCTCCAAATTTGAATGTTGTCAACCAGAATTATTTTCCACCTCAACAGAACCATCAAGTGAGACCTAATCAAGGAGTATCTGGGCTGACTTCACTTAGGCCAAATGCCTTACCAGGTCAATTTCAACCAGTTCCTGTTGGTAGTGCTACTCGTCCTCCTCAGACCATTCCCACTGGTGCACCTGGTCCTTCTGGTTCAGAATATAGACCAAGTGCCGTACCGGGTCAATTTCAGCCAGGTCCTGTTGGTAGTGTTACTCGTCCTCCTCAGGCTGTTGTGCCCACTAGTGCATCTGGTCCTGGTGGTTCAACGCTCAATCTTAATAATTTGTATGCTGGAAACACCAGCGGATACTCGTCAGGCTTTGGAGGGGGCAGCTTAGCAGAACCTTCTCCTGGCATTAAACCGGAGTCACAAGTTGATCCAAAAGCGCTAGTTATATCTGGAAACGGAGGTGACATGTTTTCCTCCTTCCAGCAAAGACCACAACCCACTCTGAGTAATTCTTCAATGAGTTCAGCCATTGTTCCTGCTTCTACTGGAACCCAACCTCCACCGAAGCCTAATGCTCTCGACTCCCTACAGAGTACTTTCTCAATGCTGCCAGCAGGAAATCAACCTCAGCAGCCAAGGCCAGCTGCAAGCTCACAGGGTCCATCCTCCGGTTTGCCACATGGAAGTGCAGTTGGACCCGGCCATCCAACTCCTGCTGGAAATAATCAGCCTCCTTGGCCTAAAATGAAACCATCCGATGTGCAGAAATACACAAAGGTGTTTATTGAAGTTGATAGTGACAGGGATGGGAGAATCACTGGTGAGCAGGCGAGGAATCTGTTCTTAAGCTGGAGGCTACCCAGGGAGGTATTGAAGCATGTGTGGGAATTATCTGATCAGGACAATGATACTATGCTTTCTCTGAGGGAGTTCTGCATTTCGTTGTATTTGATGGAGCGGTATAAAGAAGGCCGTCCTCTCCCACCAGCACTTCCTAGCAGCATCATGTATGATGAAACACTCTTATCTCTCTCGGGTGCACCTAGTCGTGGTTATGCAAATGCTGGATGGGGATCTGGTCAAGGTTTTGTTCAGCAACCAGTGATGGGCGCGCGGCCAGTCACTCCACCGACTGGCATGAGACCGCCAGTCCCTCACCCTGGCAGTGGTATAGCATCTAATGAGCAAAGGAATCAAGCGCCTGCTTTGGATGATGCTTTTGCTAGTCACCTAGGTAACGGTTATTCTGCAAGCACGAATCCTCAAGAAACAGCAGTTGATGGGGAAAAGGTTGATGAAAAGAAGAATGCTTATATGGACTCCAGAGAGAAACTTGAATACTACCGGACGAAAATGCAGGATATTGTCTTGTACAAAAGCAGGTGTGACAATATACTAAATGAGATCTCTGAAAGGGCTTCCGCTGACAAGCGTGAGGCTGAAACGTTGGCTAAGAAATACGAAGAAAAGTATAAGCAGGTTGCAGAATTAGGATCAAAATTAACTATTGAAGAGGCCAGGTTCCGAGAGATTGAGGGGCGGAAGATGGAACTGAGTCAAGCAATTGTGAACATGGAGCAAGGTGGTAGTGCTGATGGTCTACTTCAGGTCCGGGCTGACAGAATACAATAAGATCTAGAGGAGCTGATGAAGGCTTTAACTGAACGTTGCAAGAAACATGGGTTGGAGGTTAAGTCGAAGGCCCTTGTAGACCTTCCCGCTGGTTGGCAACCTGGGATTCAAGAAGGGGCAGCTCTTTGGGATGAAGAATGGGATAAGTTTGAAGATGAAGAGCAAAAATCGTCAGGTGAAAAGGAAAACGGGACGGTGGATGATGGTAGTGGACCACCACCTGATTCGCCGACTCATTTAGATGAGAACTATGGACCTTTTTCAGAAACCTCAGACCACCACCATGAGAGCGAAGATGAATCAGGCAGAAGTCCTAGAGACAGTCTGGTCTCTAGGACTGCTACTGAGGTCCCTTCTCCAGATAATGCTCATGAAAAAAGTTCTGAGTTCTTTGATGACTCGAATTGGGCGAGTGCATTTGATACTAACGATGATGTGGACTCAGTGTGGGGATTAGATGCATCAAGAAGCCAGGATGGAGATTATTTTGGTGAAAACTCAGGAAGAGCAGATTCTCCAACTTCAAGAAGCTTTGCTGGTCAGAGAAAGGGTCCATTTGGATTTGATGACTCAGTTCCCAGCACTCCACTCTCGAGATTCGGGAACTCTCCTCCTAGGTTCAGCGACGCATCAGCCAGAGATAACAACTTTGATAGCTTCTCCAGATTCGACTCCTTCAACCATAGTGAAGCTGGCGTCTCCTCCCAGCCCGAGAGACTGTCACGGTTTGATTCCATCAACAGCTCCAAAGACTTTGGGGGAGCTGCCTTCTCCAGGTTTGACTCAATCAACAGTTCCAGAGACTTTGGTGGAGGAGCTGAGAAACTATCGAGGTTTGATTCCATCAACAGTAGCAGAGACTTTGGTGGTCCCTCGCTTTCAAGATTCGACTCAATGAATAGTACAAAGGATCATGGATACTCGTTTGATGATGCAGACCCGTTTGGTTCCACAGGTCCCTTCAAAGTCTCCTTTGATGATAAAAGCCCCAAGAAAAATTCCTTCTAG
Protein:  
MGGQNPNMDQFEAYFKRADLDGDGRISGAEAVGFFQGSGLPKPVLFQIWSLSDRSGSGFLGRQDFYNSLRLVTVAQSKRDLTPEIVNAALNTPAAAKIPAPKINLSAIPAPQPNPAATTARPVSSPGHQNVGFRRPGAPNLNVVNQNYFPPQQNHQVRPNQGVSGLTSLRPNALPGQFQPVPVGSATRPPQTIPTGAPGPSGSEYRPSAVPGQFQPGPVGSVTRPPQAVVPTSASGPGGSTLNLNNLYAGNTSGYSSGFGGGSLAEPSPGIKPESQVDPKALVISGNGGDMFSSFQQRPQPTLSNSSMSSAIVPASTGTQPPPKPNALDSLQSTFSMLPAGNQPQQPRPAASSQGPSSGLPHGSAVGPGHPTPAGNNQPPWPKMKPSDVQKYTKVFIEVDSDRDGRITGEQARNLFLSWRLPREVLKHVWELSDQDNDTMLSLREFCISLYLMERYKEGRPLPPALPSSIMYDETLLSLSGAPSRGYANAGWGSGQGFVQQPVMGARPVTPPTGMRPPVPHPGSGIASNEQRNQAPALDDAFASHLGNGYSASTNPQETAVDGEKVDEKKNAYMDSREKLEYYRTKMQDIVLYKSRCDNILNEISERASADKREAETLAKKYEEKYKQVAELGSKLTIEEARFREIEGRKMELSQAIVNMEQGGSADGLLQVRADRIQXDLEELMKALTERCKKHGLEVKSKALVDLPAGWQPGIQEGAALWDEEWDKFEDEEQKSSGEKENGTVDDGSGPPPDSPTHLDENYGPFSETSDHHHESEDESGRSPRDSLVSRTATEVPSPDNAHEKSSEFFDDSNWASAFDTNDDVDSVWGLDASRSQDGDYFGENSGRADSPTSRSFAGQRKGPFGFDDSVPSTPLSRFGNSPPRFSDASARDNNFDSFSRFDSFNHSEAGVSSQPERLSRFDSINSSKDFGGAAFSRFDSINSSRDFGGGAEKLSRFDSINSSRDFGGPSLSRFDSMNSTKDHGYSFDDADPFGSTGPFKVSFDDKSPKKNSF